STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AL1_25680Protein of unknown function (DUF2723). (1075 aa)    
Predicted Functional Partners:
AL1_17330
Bacterial membrane protein YfhO.
  
     0.769
AL1_07000
Protein of unknown function (DUF3109).
 
     0.765
AL1_21890
Outer membrane protein assembly complex, YaeT protein.
  
     0.763
AL1_29970
PPIC-type PPIASE domain.
  
     0.760
AL1_21910
Outer membrane protein.
 
     0.751
AL1_23090
DNA uptake lipoprotein.
  
   
 0.749
AL1_28380
Protein of unknown function (DUF2795).
  
     0.737
AL1_11010
Protein of unknown function (DUF3108).
  
     0.734
AL1_30010
Hypothetical protein.
 
     0.723
AL1_02100
Protein translocase, SecG subunit; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family.
 
     0.715
Your Current Organism:
Alistipes shahii
NCBI taxonomy Id: 717959
Other names: A. shahii WAL 8301, Alistipes shahii WAL 8301, Alistipes shahii str. WAL 8301, Alistipes shahii strain WAL 8301, Alistipes sp. WAL 8301
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.