STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EC1_04510Hypothetical protein. (129 aa)    
Predicted Functional Partners:
EC1_04500
Hypothetical protein.
 
     0.928
EC1_04490
Hypothetical protein.
 
     0.904
EC1_04560
Hypothetical protein.
 
     0.764
EC1_10370
Hypothetical protein.
 
     0.764
EC1_04540
Cell wall-associated hydrolases (invasion-associated proteins).
 
     0.747
EC1_10380
Hypothetical protein.
  
     0.723
EC1_10310
Hypothetical protein.
 
     0.676
EC1_10410
Hypothetical protein.
  
     0.664
EC1_04460
Type IV secretory pathway, VirD4 components.
  
     0.638
EC1_10320
Hypothetical protein.
 
     0.617
Your Current Organism:
Faecalitalea cylindroides
NCBI taxonomy Id: 717960
Other names: Eubacterium cylindroides T2-87, F. cylindroides T2-87, Faecalitalea cylindroides T2-87
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.