STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EC1_06100Bacterial mobilisation protein (MobC)./Ribbon-helix-helix protein, copG family. (113 aa)    
Predicted Functional Partners:
EC1_06080
Hypothetical protein.
 
     0.948
EC1_06090
Relaxase/Mobilisation nuclease domain.
 
     0.947
EC1_06070
Hypothetical protein.
 
     0.938
EC1_06040
Hypothetical protein.
 
     0.936
EC1_06050
Type IV secretory pathway, VirD4 components.
 
     0.905
EC1_06140
Hypothetical protein.
 
     0.875
EC1_06060
Hypothetical protein.
       0.781
EC1_06590
Hypothetical protein.
 
     0.781
EC1_06540
Hypothetical protein.
 
     0.780
EC1_06550
Hypothetical protein.
 
     0.780
Your Current Organism:
Faecalitalea cylindroides
NCBI taxonomy Id: 717960
Other names: Eubacterium cylindroides T2-87, F. cylindroides T2-87, Faecalitalea cylindroides T2-87
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.