STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EC1_06670Hypothetical protein. (111 aa)    
Predicted Functional Partners:
EC1_06680
DNA methylase.
  
    0.777
EC1_06690
Hypothetical protein.
       0.717
EC1_06730
Hypothetical protein.
       0.716
EC1_06710
Hypothetical protein.
       0.715
EC1_06700
Hypothetical protein.
       0.711
EC1_06720
Hypothetical protein.
       0.711
EC1_06740
Hypothetical protein.
       0.711
EC1_06750
Hypothetical protein.
       0.711
EC1_06660
Hypothetical protein.
       0.551
EC1_06760
Hypothetical protein.
       0.542
Your Current Organism:
Faecalitalea cylindroides
NCBI taxonomy Id: 717960
Other names: Eubacterium cylindroides T2-87, F. cylindroides T2-87, Faecalitalea cylindroides T2-87
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.