STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EC1_11030SUF system FeS assembly protein, NifU family. (147 aa)    
Predicted Functional Partners:
EC1_14660
Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes.
 
 0.999
EC1_11020
Iron-regulated ABC transporter membrane component SufB.
 
  
 0.988
EC1_11060
FeS assembly ATPase SufC.
  
  
 0.951
EC1_07640
Molecular chaperone.
  
 
 0.841
dnaK
Chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
  
 
 0.841
EC1_09950
Plasmid segregation actin-type ATPase ParM.
  
 
 0.841
EC1_01660
Thioredoxin-like proteins and domains.
  
 
 0.764
EC1_14500
Hypothetical protein.
   
 
 0.741
EC1_14510
Phosphatidylserine/phosphatidylglycerophosphate/ cardiolipin synthases and related enzymes.
   
 
 0.741
EC1_09970
Hypothetical protein.
   
 
 0.709
Your Current Organism:
Faecalitalea cylindroides
NCBI taxonomy Id: 717960
Other names: Eubacterium cylindroides T2-87, F. cylindroides T2-87, Faecalitalea cylindroides T2-87
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.