STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EC1_11080Hypothetical protein. (303 aa)    
Predicted Functional Partners:
EC1_11070
PPIC-type PPIASE domain.
       0.824
EC1_00180
Signal transduction histidine kinase.
  
 
 
 0.785
EC1_14680
Negative regulator of septation ring formation.
  
     0.774
EC1_03290
aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatC family.
 
     0.770
EC1_04130
Uncharacterized protein conserved in bacteria.
 
    0.762
EC1_01920
Hypothetical protein.
  
    0.717
EC1_07940
Inorganic pyrophosphatase.
 
    0.716
EC1_13960
Protein translocase subunit yidC.
 
  
 0.692
EC1_02200
Domain of unknown function(DUF2779).
  
     0.687
EC1_15630
Putative translation initiation inhibitor, yjgF family.
 
    0.650
Your Current Organism:
Faecalitalea cylindroides
NCBI taxonomy Id: 717960
Other names: Eubacterium cylindroides T2-87, F. cylindroides T2-87, Faecalitalea cylindroides T2-87
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.