STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EC1_19370Threonine dehydrogenase and related Zn-dependent dehydrogenases. (420 aa)    
Predicted Functional Partners:
EC1_19350
PTS system D-mannitol-specific IIA component, Fru family (TC 4.A.2.1.2)/PTS system D-mannitol-specific IIB component, Fru family (TC 4.A.2.1.2)/PTS system D-mannitol-specific IIC component, Fru family (TC 4.A.2.1.2).
 
  
 0.900
EC1_01630
Pyruvate:ferredoxin (flavodoxin) oxidoreductase, homodimeric.
     
 0.723
EC1_19360
Transcriptional regulators of sugar metabolism.
     
 0.600
EC1_12020
Nucleoside-diphosphate-sugar epimerases.
  
  
 0.570
EC1_04020
NAD-dependent aldehyde dehydrogenases; Belongs to the aldehyde dehydrogenase family.
  
 
 0.470
EC1_12320
Thermophilic glucose-6-phosphate isomerase and related metalloenzymes.
 
     0.468
EC1_20220
Transcriptional antiterminator.
 
  
 0.438
EC1_12470
Transaldolase.
  
 
 0.413
Your Current Organism:
Faecalitalea cylindroides
NCBI taxonomy Id: 717960
Other names: Eubacterium cylindroides T2-87, F. cylindroides T2-87, Faecalitalea cylindroides T2-87
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.