STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EC1_21090Hypothetical protein. (88 aa)    
Predicted Functional Partners:
EC1_21080
ABC-type spermidine/putrescine transport system, permease component I.
  
 
 0.928
EC1_21060
Spermidine/putrescine-binding periplasmic protein.
  
  
 0.914
EC1_21070
ABC-type spermidine/putrescine transport system, permease component II.
  
  
 0.908
EC1_17760
ABC-type polar amino acid transport system, ATPase component.
      0.834
EC1_18160
ABC-type spermidine/putrescine transport systems, ATPase components; Belongs to the ABC transporter superfamily.
 
      0.775
pstB
Phosphate ABC transporter ATP-binding protein, PhoT family (TC 3.A.1.7.1); Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family.
 
    
 0.616
ftsE
Cell division ATP-binding protein FtsE; Part of the ABC transporter FtsEX involved in cellular division.
 
 
    0.599
EC1_05400
ABC-type spermidine/putrescine transport system, permease component II.
  
  
 0.570
EC1_04850
ABC-type antimicrobial peptide transport system, ATPase component.
 
 
    0.527
EC1_14870
ABC-type polar amino acid transport system, ATPase component.
      0.525
Your Current Organism:
Faecalitalea cylindroides
NCBI taxonomy Id: 717960
Other names: Eubacterium cylindroides T2-87, F. cylindroides T2-87, Faecalitalea cylindroides T2-87
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.