STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CC1_02090Hypothetical protein. (99 aa)    
Predicted Functional Partners:
CC1_02100
Hypothetical protein.
 
    0.922
CC1_02050
Cna protein B-type domain.
 
     0.810
CC1_02140
Hypothetical protein.
 
     0.769
CC1_02120
Hypothetical protein.
 
     0.720
CC1_02040
ParB-like partition proteins; Belongs to the ParB family.
 
     0.690
CC1_02150
Hypothetical protein.
 
     0.674
CC1_02130
Type IV secretory pathway, VirD4 components.
 
    0.639
CC1_02000
Hypothetical protein.
  
     0.586
CC1_30500
Hypothetical protein.
 
     0.541
CC1_02070
Hypothetical protein.
       0.488
Your Current Organism:
Coprococcus catus
NCBI taxonomy Id: 717962
Other names: C. catus GD/7, Coprococcus catus GD/7, Coprococcus catus str. GD/7, Coprococcus catus strain GD/7
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.