STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CC1_11450Hypothetical protein. (403 aa)    
Predicted Functional Partners:
CC1_11430
Hypothetical protein.
 
     0.959
CC1_11440
ABC-type multidrug transport system, ATPase component.
 
   0.958
CC1_29400
ABC-type multidrug transport system, ATPase component.
 
   0.730
CC1_31630
Hypothetical protein.
  
     0.660
CC1_06060
Accessory gene regulator B.
  
     0.578
CC1_31620
ABC-type multidrug transport system, ATPase component.
 
   0.519
CC1_30210
ABC-type multidrug transport system, ATPase component.
 
   0.459
CC1_28780
ABC-type multidrug transport system, ATPase component.
 
   0.452
CC1_10040
Hypothetical protein.
  
     0.440
CC1_31740
Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen.
  
     0.420
Your Current Organism:
Coprococcus catus
NCBI taxonomy Id: 717962
Other names: C. catus GD/7, Coprococcus catus GD/7, Coprococcus catus str. GD/7, Coprococcus catus strain GD/7
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.