STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CC1_16010ATPase components of various ABC-type transport systems, contain duplicated ATPase; Belongs to the ABC transporter superfamily. (586 aa)    
Predicted Functional Partners:
CC1_15990
ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
 
  
 0.956
CC1_16000
ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
  
 0.956
CC1_28580
ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
  
 0.836
CC1_24160
ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
  
 0.814
CC1_03560
ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
  
 0.813
CC1_03410
ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
 
  
 0.802
CC1_28570
ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
 
  
 0.801
CC1_10990
ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
  
 0.798
CC1_03420
ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
  
 0.794
CC1_27490
ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
  
 0.781
Your Current Organism:
Coprococcus catus
NCBI taxonomy Id: 717962
Other names: C. catus GD/7, Coprococcus catus GD/7, Coprococcus catus str. GD/7, Coprococcus catus strain GD/7
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.