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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CC1_16640Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit. (491 aa)    
Predicted Functional Partners:
CC1_16620
Multisubunit Na+/H+ antiporter, MnhC subunit.
 
 
 0.995
CC1_16570
Multisubunit Na+/H+ antiporter, MnhE subunit.
 
 
 0.994
CC1_16580
Multisubunit Na+/H+ antiporter, MnhF subunit.
 
 
 0.994
CC1_16610
Multisubunit Na+/H+ antiporter, MnhB subunit.
 
 
 0.994
CC1_16590
Multisubunit Na+/H+ antiporter, MnhG subunit.
 
 
 0.993
CC1_16600
Hypothetical protein.
 
 
 0.965
CC1_16630
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit.
 
    
0.834
CC1_16650
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit.
 
    
0.794
CC1_16660
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit.
 
    
0.782
rnfB
Electron transport complex, RnfABCDGE type, B subunit; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfB subfamily.
  
 
 0.540
Your Current Organism:
Coprococcus catus
NCBI taxonomy Id: 717962
Other names: C. catus GD/7, Coprococcus catus GD/7, Coprococcus catus str. GD/7, Coprococcus catus strain GD/7
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