STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CC1_27770Hypothetical protein. (74 aa)    
Predicted Functional Partners:
CC1_27780
Uncharacterized conserved protein.
       0.773
CC1_31740
Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen.
  
     0.493
CC1_27760
Predicted permease.
       0.457
CC1_28040
Protein of unknown function (DUF1703)./Predicted AAA-ATPase.
  
     0.451
CC1_00950
Predicted AAA-ATPase.
  
     0.437
CC1_25760
Hypothetical protein.
  
     0.412
CC1_25640
Replication initiator protein A (RepA) N-terminus.
  
     0.411
CC1_26370
DNA binding domain, excisionase family.
  
     0.407
CC1_01700
Hypothetical protein.
 
     0.403
CC1_22140
Putative transposase, YhgA-like.
  
     0.403
Your Current Organism:
Coprococcus catus
NCBI taxonomy Id: 717962
Other names: C. catus GD/7, Coprococcus catus GD/7, Coprococcus catus str. GD/7, Coprococcus catus strain GD/7
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.