STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CC1_32020NADH dehydrogenase subunit E. (79 aa)    
Predicted Functional Partners:
CC1_10630
NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit.
 
 0.999
CC1_06320
Putative selenate reductase, YgfK subunit.
  
 0.990
rnfB
Electron transport complex, RnfABCDGE type, B subunit; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfB subfamily.
  
 0.979
CC1_10640
Hydrogenases, Fe-only.
 
 
 0.970
CC1_32050
Iron only hydrogenase large subunit, C-terminal domain.
 
 
 0.969
CC1_15250
4Fe-4S binding domain.
  
 0.956
CC1_10700
PAS domain S-box.
 
 
 0.940
CC1_10620
Ferredoxin.
 
 
 0.923
CC1_34360
Predicted Zn-dependent peptidases; Belongs to the peptidase M16 family.
   
 
 0.914
CC1_10570
Iron only hydrogenase large subunit, C-terminal domain.
 
 
 0.891
Your Current Organism:
Coprococcus catus
NCBI taxonomy Id: 717962
Other names: C. catus GD/7, Coprococcus catus GD/7, Coprococcus catus str. GD/7, Coprococcus catus strain GD/7
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