close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CC1_32050Iron only hydrogenase large subunit, C-terminal domain. (487 aa)    
Predicted Functional Partners:
CC1_10630
NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit.
 
 
 
 0.971
CC1_34350
Pyruvate:ferredoxin (flavodoxin) oxidoreductase, homodimeric.
  
 
 0.921
CC1_32040
Stage II sporulation protein E (SpoIIE).
 
     0.880
CC1_32020
NADH dehydrogenase subunit E.
 
 
 0.850
CC1_10640
Hydrogenases, Fe-only.
 
 
 
0.826
CC1_10620
Ferredoxin.
 
 
 0.722
CC1_02710
Succinate dehydrogenase/fumarate reductase, flavoprotein subunit.
  
 
 0.696
CC1_28590
Succinate dehydrogenase/fumarate reductase, flavoprotein subunit.
  
 
 0.696
rnfB
Electron transport complex, RnfABCDGE type, B subunit; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfB subfamily.
 
  
 0.659
CC1_23910
Thiamine biosynthesis enzyme ThiH and related uncharacterized enzymes.
 
  
 0.654
Your Current Organism:
Coprococcus catus
NCBI taxonomy Id: 717962
Other names: C. catus GD/7, Coprococcus catus GD/7, Coprococcus catus str. GD/7, Coprococcus catus strain GD/7
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.