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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CC1_32080Hypothetical protein. (206 aa)    
Predicted Functional Partners:
CC1_10630
NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit.
  
 
 0.931
CC1_32020
NADH dehydrogenase subunit E.
   
   0.906
CC1_06320
Putative selenate reductase, YgfK subunit.
  
   0.712
rnfB
Electron transport complex, RnfABCDGE type, B subunit; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfB subfamily.
  
   0.711
CC1_15250
4Fe-4S binding domain.
   
   0.710
CC1_03760
Hypothetical protein.
    
 
 0.557
CC1_05570
Phosphopantetheine attachment site.
  
   0.534
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
  
   0.534
CC1_17290
Phosphopantetheine attachment site.
  
   0.534
acpP-2
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis; Belongs to the acyl carrier protein (ACP) family.
  
   0.534
Your Current Organism:
Coprococcus catus
NCBI taxonomy Id: 717962
Other names: C. catus GD/7, Coprococcus catus GD/7, Coprococcus catus str. GD/7, Coprococcus catus strain GD/7
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.