Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
FP2_00550Hypothetical protein. (245 aa)    
Predicted Functional Partners:
FP2_00570
Cell wall-associated hydrolases (invasion-associated proteins).
 
     0.916
FP2_00560
Hypothetical protein.
       0.775
FP2_09010
Hypothetical protein.
 
     0.754
FP2_10260
Hypothetical protein.
 
     0.753
FP2_21680
Hypothetical protein.
 
     0.753
FP2_21810
Hypothetical protein.
 
     0.736
FP2_09420
Hypothetical protein.
 
     0.725
FP2_21550
Hypothetical protein.
 
     0.719
FP2_22330
Hypothetical protein.
 
     0.683
FP2_09340
Cell wall-associated hydrolases (invasion-associated proteins).
 
     0.680
Your Current Organism:
Faecalibacterium prausnitzii L26
NCBI taxonomy Id: 718252
Other names: F. prausnitzii L2-6, Faecalibacterium prausnitzii L2-6, Faecalibacterium prausnitzii str. L2-6, Faecalibacterium prausnitzii strain L2-6, butyrate-producing bacterium L2-6
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