STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FP2_01190Na+/citrate symporter. (411 aa)    
Predicted Functional Partners:
FP2_01180
Hypothetical protein.
       0.741
citG
holo-ACP synthase CitX/triphosphoribosyl-dephospho-CoA synthase CitG.
 
   
 0.644
FP2_22940
Malic enzyme.
  
  
 0.598
citD
Citrate lyase acyl carrier protein; Covalent carrier of the coenzyme of citrate lyase.
 
   
 0.518
FP2_22080
Protein of unknown function (DUF1266).
  
     0.472
FP2_25370
Citrate lyase, alpha subunit.
 
   
 0.436
FP2_25360
Citrate lyase beta subunit; Belongs to the HpcH/HpaI aldolase family.
 
   
 0.432
FP2_01170
Hypothetical protein.
       0.430
FP2_21230
[citrate (pro-3S)-lyase] ligase; Acetylation of prosthetic group (2-(5''-phosphoribosyl)-3'- dephosphocoenzyme-A) of the gamma subunit of citrate lyase.
 
   
 0.428
FP2_01200
Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
     
 0.419
Your Current Organism:
Faecalibacterium prausnitzii L26
NCBI taxonomy Id: 718252
Other names: F. prausnitzii L2-6, Faecalibacterium prausnitzii L2-6, Faecalibacterium prausnitzii str. L2-6, Faecalibacterium prausnitzii strain L2-6, butyrate-producing bacterium L2-6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.