Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
FP2_01240Hypothetical protein. (676 aa)    
Predicted Functional Partners:
FP2_02740
Hypothetical protein.
 
     0.723
FP2_01250
Hypothetical protein.
       0.572
FP2_19820
Transcriptional regulator, MarR family.
  
     0.555
FP2_25440
Putative GTPases (G3E family).
  
     0.539
FP2_02730
Cobalamin biosynthesis protein CbiK, Co2+ chelatase.
  
     0.493
FP2_29340
Hypothetical protein.
  
     0.488
FP2_12450
Predicted transcription factor, homolog of eukaryotic MBF1.
  
     0.479
FP2_13420
Excisionase from transposon Tn916.
  
     0.441
FP2_02750
ABC-type Fe3+-hydroxamate transport system, periplasmic component.
 
     0.400
Your Current Organism:
Faecalibacterium prausnitzii L26
NCBI taxonomy Id: 718252
Other names: F. prausnitzii L2-6, Faecalibacterium prausnitzii L2-6, Faecalibacterium prausnitzii str. L2-6, Faecalibacterium prausnitzii strain L2-6, butyrate-producing bacterium L2-6
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