STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FP2_01690Ricin-type beta-trefoil lectin domain. (277 aa)    
Predicted Functional Partners:
FP2_07140
Protein of unknown function (DUF964); Belongs to the UPF0342 family.
  
     0.558
FP2_30270
Hypothetical protein.
  
     0.543
FP2_22610
Hypothetical protein.
  
     0.527
FP2_24560
Hypothetical protein.
  
     0.521
FP2_01680
Putative efflux protein, MATE family.
 
     0.510
FP2_08280
Hypothetical protein.
  
     0.486
FP2_26370
Hypothetical protein.
  
     0.485
FP2_25530
Hypothetical protein.
  
    0.423
FP2_23820
Hypothetical protein.
  
     0.420
FP2_30340
Carboxylesterase type B.
  
 
 
 0.401
Your Current Organism:
Faecalibacterium prausnitzii L26
NCBI taxonomy Id: 718252
Other names: F. prausnitzii L2-6, Faecalibacterium prausnitzii L2-6, Faecalibacterium prausnitzii str. L2-6, Faecalibacterium prausnitzii strain L2-6, butyrate-producing bacterium L2-6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.