STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FP2_02590Iron only hydrogenase large subunit, C-terminal domain. (517 aa)    
Predicted Functional Partners:
FP2_19990
Pyruvate:ferredoxin (flavodoxin) oxidoreductase, homodimeric.
  
 
 0.884
rnfB
Predicted NADH:ubiquinone oxidoreductase, subunit RnfB; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfB subfamily.
   
 
 0.805
FP2_20700
Uncharacterized protein conserved in bacteria.
  
 
 0.649
FP2_23780
Uncharacterized protein conserved in bacteria.
  
 
 0.649
FP2_29160
TAT (twin-arginine translocation) pathway signal sequence.
  
 
 0.644
FP2_26830
Hypothetical protein.
  
  
 0.571
FP2_02600
MiaB-like tRNA modifying enzyme.
 
     0.558
FP2_01540
Phosphoribosylformylglycinamidine synthase.
 
    0.525
FP2_26030
Fe-S-cluster-containing hydrogenase components 1.
     
0.494
dnaJ
Chaperone protein DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, D [...]
   
 
 0.490
Your Current Organism:
Faecalibacterium prausnitzii L26
NCBI taxonomy Id: 718252
Other names: F. prausnitzii L2-6, Faecalibacterium prausnitzii L2-6, Faecalibacterium prausnitzii str. L2-6, Faecalibacterium prausnitzii strain L2-6, butyrate-producing bacterium L2-6
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