STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FP2_02590Iron only hydrogenase large subunit, C-terminal domain. (517 aa)    
Predicted Functional Partners:
FP2_21000
Sulfide dehydrogenase (flavoprotein) subunit SudA.
 
 
 0.873
FP2_14600
NADPH-dependent glutamate synthase beta chain and related oxidoreductases.
   
 
 0.841
FP2_19270
Glutamate synthase (NADH) small subunit.
   
 
 0.841
FP2_19990
Pyruvate:ferredoxin (flavodoxin) oxidoreductase, homodimeric.
  
 
 0.826
FP2_20340
Uncharacterized Fe-S center protein.
  
 
 0.767
FP2_26830
Hypothetical protein.
  
 
 0.750
hcp
Hydroxylamine reductase; Catalyzes the reduction of hydroxylamine to form NH(3) and H(2)O.
    
 
 0.721
FP2_29340
Hypothetical protein.
    
 
 0.721
rnfB
Predicted NADH:ubiquinone oxidoreductase, subunit RnfB; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfB subfamily.
   
 
 0.695
FP2_19880
Dissimilatory sulfite reductase (desulfoviridin), alpha and beta subunits.
  
 
 0.602
Your Current Organism:
Faecalibacterium prausnitzii L26
NCBI taxonomy Id: 718252
Other names: F. prausnitzii L2-6, Faecalibacterium prausnitzii L2-6, Faecalibacterium prausnitzii str. L2-6, Faecalibacterium prausnitzii strain L2-6, butyrate-producing bacterium L2-6
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