STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FP2_03350Hypothetical protein. (70 aa)    
Predicted Functional Partners:
FP2_03360
TrbL/VirB6 plasmid conjugal transfer protein.
 
     0.921
FP2_03370
DNA modification methylase; Belongs to the N(4)/N(6)-methyltransferase family.
  
  
 0.726
FP2_04610
TrbL/VirB6 plasmid conjugal transfer protein.
 
     0.693
FP2_22330
Hypothetical protein.
 
     0.691
FP2_03340
Type IV secretory pathway, VirD4 components.
 
     0.680
FP2_03330
Hypothetical protein.
 
     0.610
FP2_04570
Hypothetical protein.
 
     0.526
FP2_21810
Hypothetical protein.
 
     0.480
FP2_12840
Hypothetical protein.
 
     0.447
FP2_21930
Hypothetical protein.
 
     0.436
Your Current Organism:
Faecalibacterium prausnitzii L26
NCBI taxonomy Id: 718252
Other names: F. prausnitzii L2-6, Faecalibacterium prausnitzii L2-6, Faecalibacterium prausnitzii str. L2-6, Faecalibacterium prausnitzii strain L2-6, butyrate-producing bacterium L2-6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.