STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FP2_04400ABC-type multidrug transport system, ATPase and permease components. (353 aa)    
Predicted Functional Partners:
FP2_04430
Conserved hypothetical integral membrane protein TIGR02185.
  
     0.759
FP2_11750
Conserved hypothetical integral membrane protein TIGR02185.
  
     0.758
FP2_04440
Transcriptional regulator, AraC family.
  
    0.756
FP2_11740
Transcriptional regulator, AraC family.
  
    0.749
FP2_14270
Conserved hypothetical integral membrane protein TIGR02185.
  
     0.630
FP2_19090
ATPase components of various ABC-type transport systems, contain duplicated ATPase.
 
     0.624
FP2_23610
Conserved hypothetical integral membrane protein TIGR02185.
  
     0.594
FP2_11720
Hypothetical protein.
 
     0.592
FP2_14190
Transcriptional regulator, AraC family.
  
    0.574
FP2_23600
Transcriptional regulator, TetR family.
  
     0.571
Your Current Organism:
Faecalibacterium prausnitzii L26
NCBI taxonomy Id: 718252
Other names: F. prausnitzii L2-6, Faecalibacterium prausnitzii L2-6, Faecalibacterium prausnitzii str. L2-6, Faecalibacterium prausnitzii strain L2-6, butyrate-producing bacterium L2-6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.