STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FP2_04440Transcriptional regulator, AraC family. (321 aa)    
Predicted Functional Partners:
FP2_04430
Conserved hypothetical integral membrane protein TIGR02185.
 
    0.770
FP2_04400
ABC-type multidrug transport system, ATPase and permease components.
  
    0.756
FP2_24200
Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain.
  
   0.716
FP2_04380
ABC-type multidrug transport system, ATPase and permease components.
  
    0.702
FP2_04110
Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain.
  
     0.692
FP2_18350
AraC-type DNA-binding domain-containing proteins.
  
   0.636
FP2_11750
Conserved hypothetical integral membrane protein TIGR02185.
 
    0.558
FP2_08900
Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain.
  
     0.556
FP2_17230
AraC-type DNA-binding domain-containing proteins.
  
     0.552
FP2_32190
Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain.
  
     0.523
Your Current Organism:
Faecalibacterium prausnitzii L26
NCBI taxonomy Id: 718252
Other names: F. prausnitzii L2-6, Faecalibacterium prausnitzii L2-6, Faecalibacterium prausnitzii str. L2-6, Faecalibacterium prausnitzii strain L2-6, butyrate-producing bacterium L2-6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.