STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FP2_04670Replication initiator protein A (RepA) N-terminus. (264 aa)    
Predicted Functional Partners:
FP2_04660
Phage DNA replication protein (predicted replicative helicase loader).
 
  
 0.944
FP2_04650
Hypothetical protein.
 
     0.928
FP2_04680
Hypothetical protein.
 
     0.845
FP2_04700
Bacterial mobilisation protein (MobC).
 
     0.750
FP2_04710
Hypothetical protein.
  
     0.625
FP2_29840
Relaxase/Mobilisation nuclease domain.
 
     0.612
FP2_22740
Relaxase/Mobilisation nuclease domain.
 
     0.605
FP2_04720
Sigma-70, region 4.
  
    0.604
FP2_08550
Bacterial mobilisation protein (MobC).
 
     0.596
FP2_29850
Bacterial mobilisation protein (MobC)./Ribbon-helix-helix protein, copG family.
  
     0.512
Your Current Organism:
Faecalibacterium prausnitzii L26
NCBI taxonomy Id: 718252
Other names: F. prausnitzii L2-6, Faecalibacterium prausnitzii L2-6, Faecalibacterium prausnitzii str. L2-6, Faecalibacterium prausnitzii strain L2-6, butyrate-producing bacterium L2-6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.