STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FP2_04710Hypothetical protein. (70 aa)    
Predicted Functional Partners:
FP2_04720
Sigma-70, region 4.
 
     0.950
FP2_04730
Methylase involved in ubiquinone/menaquinone biosynthesis.
 
     0.842
FP2_04650
Hypothetical protein.
  
     0.750
FP2_04700
Bacterial mobilisation protein (MobC).
  
     0.748
FP2_04660
Phage DNA replication protein (predicted replicative helicase loader).
  
     0.716
FP2_08550
Bacterial mobilisation protein (MobC).
  
     0.715
FP2_29840
Relaxase/Mobilisation nuclease domain.
  
     0.701
FP2_08510
Hypothetical protein.
  
     0.694
FP2_22740
Relaxase/Mobilisation nuclease domain.
  
     0.694
FP2_29850
Bacterial mobilisation protein (MobC)./Ribbon-helix-helix protein, copG family.
  
     0.654
Your Current Organism:
Faecalibacterium prausnitzii L26
NCBI taxonomy Id: 718252
Other names: F. prausnitzii L2-6, Faecalibacterium prausnitzii L2-6, Faecalibacterium prausnitzii str. L2-6, Faecalibacterium prausnitzii strain L2-6, butyrate-producing bacterium L2-6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.