STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FP2_05850Sugar transferases involved in lipopolysaccharide synthesis. (224 aa)    
Predicted Functional Partners:
FP2_31720
ATPases involved in chromosome partitioning.
 
  
 0.957
FP2_23140
Predicted glycosyltransferases.
  
  
 0.950
FP2_26530
Predicted glycosyltransferases.
  
  
 0.950
FP2_31570
Nucleoside-diphosphate-sugar epimerases.
  
  
 0.868
FP2_27040
Hypothetical protein.
  
  
 0.824
FP2_31600
Polysaccharide biosynthesis protein.
  
  
 0.824
FP2_10420
FOG: GGDEF domain.
  
  
 0.799
FP2_10430
Hypothetical protein.
  
  
 0.799
FP2_26380
Predicted glycosyltransferases.
 
  
 0.760
FP2_31620
Acetyltransferase (isoleucine patch superfamily).
  
  
 0.752
Your Current Organism:
Faecalibacterium prausnitzii L26
NCBI taxonomy Id: 718252
Other names: F. prausnitzii L2-6, Faecalibacterium prausnitzii L2-6, Faecalibacterium prausnitzii str. L2-6, Faecalibacterium prausnitzii strain L2-6, butyrate-producing bacterium L2-6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.