STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FP2_06250Sporulation protein, YlmC/YmxH family. (97 aa)    
Predicted Functional Partners:
FP2_01970
Stage II sporulation protein R (spore_II_R).
 
     0.792
FP2_24260
ATP-dependent Clp protease proteolytic subunit ClpP.
 
   
 0.784
FP2_05980
Sporulation protein YtfJ.
  
  
 0.782
FP2_12240
Stage V sporulation protein AC.
  
    0.769
FP2_23190
Phosphopantothenoylcysteine synthetase/decarboxylase.
 
     0.757
FP2_07620
Uncharacterized protein conserved in bacteria.
  
    0.755
FP2_12180
Stage II sporulation protein P.
  
     0.740
FP2_08190
Stage IV sporulation protein B.
  
     0.737
FP2_11350
Stage II sporulation protein E (SpoIIE).
  
     0.736
FP2_12360
Transcriptional regulator, AbrB family.
  
     0.731
Your Current Organism:
Faecalibacterium prausnitzii L26
NCBI taxonomy Id: 718252
Other names: F. prausnitzii L2-6, Faecalibacterium prausnitzii L2-6, Faecalibacterium prausnitzii str. L2-6, Faecalibacterium prausnitzii strain L2-6, butyrate-producing bacterium L2-6
Server load: medium (46%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.