STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FP2_06980Xanthine dehydrogenase, molybdenum binding subunit apoprotein. (766 aa)    
Predicted Functional Partners:
FP2_06970
Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs.
 
 0.999
FP2_06960
Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs.
 
 
 0.996
FP2_06990
Probable selenium-dependent hydroxylase accessory protein YqeC.
 
   
 0.937
FP2_06950
Uncharacterized MobA-related protein.
 
   
 0.922
FP2_07040
Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family.
 
  
 0.866
selD
Selenophosphate synthase; Synthesizes selenophosphate from selenide and ATP.
     
 0.805
FP2_07050
Selenium-dependent molybdenum hydroxylase system protein, YqeB family.
 
  
 0.745
FP2_07010
Selenium metabolism protein YedF; Belongs to the sulfur carrier protein TusA family.
       0.718
FP2_06200
Uracil-xanthine permease.
 
  
 0.660
FP2_19990
Pyruvate:ferredoxin (flavodoxin) oxidoreductase, homodimeric.
  
  
 0.557
Your Current Organism:
Faecalibacterium prausnitzii L26
NCBI taxonomy Id: 718252
Other names: F. prausnitzii L2-6, Faecalibacterium prausnitzii L2-6, Faecalibacterium prausnitzii str. L2-6, Faecalibacterium prausnitzii strain L2-6, butyrate-producing bacterium L2-6
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