STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
FP2_07010Selenium metabolism protein YedF; Belongs to the sulfur carrier protein TusA family. (200 aa)    
Predicted Functional Partners:
selD
Selenophosphate synthase; Synthesizes selenophosphate from selenide and ATP.
 
   
 0.954
FP2_06990
Probable selenium-dependent hydroxylase accessory protein YqeC.
 
   
 0.895
FP2_06920
Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes.
   
 
 0.829
FP2_23220
Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes.
   
 
 0.829
FP2_07030
Protein of unknown function (DUF3343).
 
   
 0.762
FP2_06970
Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs.
     
 0.736
FP2_06960
Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs.
 
     0.720
FP2_06980
Xanthine dehydrogenase, molybdenum binding subunit apoprotein.
       0.718
FP2_06950
Uncharacterized MobA-related protein.
 
   
 0.664
FP2_07050
Selenium-dependent molybdenum hydroxylase system protein, YqeB family.
 
 
 
 0.613
Your Current Organism:
Faecalibacterium prausnitzii L26
NCBI taxonomy Id: 718252
Other names: F. prausnitzii L2-6, Faecalibacterium prausnitzii L2-6, Faecalibacterium prausnitzii str. L2-6, Faecalibacterium prausnitzii strain L2-6, butyrate-producing bacterium L2-6
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