Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
FP2_07700Uncharacterized protein conserved in bacteria. (123 aa)    
Predicted Functional Partners:
nusB
Transcription antitermination factor NusB; Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons.
  
    0.688
FP2_07640
Stage III sporulation protein AC.
 
     0.640
FP2_07690
Hypothetical protein.
  
    0.611
FP2_07680
Hypothetical protein.
 
     0.610
FP2_07650
Stage III sporulation protein AC/AD protein family.
 
    0.605
FP2_07660
Stage III sporulation protein AE (spore_III_AE).
  
    0.546
FP2_05590
DAK2 domain fusion protein YloV.
  
  
 0.511
FP2_07620
Uncharacterized protein conserved in bacteria.
 
     0.475
FP2_05600
Uncharacterized protein conserved in bacteria.
  
   
 0.448
FP2_08190
Stage IV sporulation protein B.
 
     0.420
Your Current Organism:
Faecalibacterium prausnitzii L26
NCBI taxonomy Id: 718252
Other names: F. prausnitzii L2-6, Faecalibacterium prausnitzii L2-6, Faecalibacterium prausnitzii str. L2-6, Faecalibacterium prausnitzii strain L2-6, butyrate-producing bacterium L2-6
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