STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
potASpermidine/putrescine ABC transporter ATP-binding subunit; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Spermidine/putrescine importer (TC 3.A.1.11.1) family. (348 aa)    
Predicted Functional Partners:
FP2_08080
ABC-type spermidine/putrescine transport system, permease component I.
 0.998
FP2_08060
Spermidine/putrescine-binding periplasmic protein.
 
 
 0.997
FP2_08070
ABC-type spermidine/putrescine transport system, permease component II.
 
 
 0.997
FP2_28940
ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component.
 
     
0.761
FP2_18440
ABC-type transport system, involved in lipoprotein release, permease component.
 
 
  
 0.739
FP2_08050
Acyl-ACP thioesterase.
       0.603
FP2_10650
ABC-type Fe3+ transport system, permease component.
 
  
 0.555
FP2_25930
Molybdate ABC transporter, permease protein; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.
 
  
 0.488
FP2_10630
ABC-type Fe3+ transport system, periplasmic component.
  
  
 0.470
FP2_10640
ABC-type spermidine/putrescine transport systems, ATPase components; Belongs to the ABC transporter superfamily.
  
  
 
0.427
Your Current Organism:
Faecalibacterium prausnitzii L26
NCBI taxonomy Id: 718252
Other names: F. prausnitzii L2-6, Faecalibacterium prausnitzii L2-6, Faecalibacterium prausnitzii str. L2-6, Faecalibacterium prausnitzii strain L2-6, butyrate-producing bacterium L2-6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.