STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FP2_08680Carbohydrate ABC transporter membrane protein 1, CUT1 family (TC 3.A.1.1.-). (315 aa)    
Predicted Functional Partners:
FP2_08690
Carbohydrate ABC transporter membrane protein 2, CUT1 family (TC 3.A.1.1.-).
 
  
 0.945
FP2_08700
Carbohydrate ABC transporter substrate-binding protein, CUT1 family (TC 3.A.1.1.-).
 
  
 0.902
FP2_08760
ABC-type sugar transport system, permease component.
 
  
 0.788
FP2_08660
Predicted integral membrane protein.
 
    0.694
FP2_08670
Transcriptional regulators.
 
     0.645
FP2_17200
Carbohydrate ABC transporter membrane protein 2, CUT1 family (TC 3.A.1.1.-).
 
  
 0.635
FP2_08710
Beta-fructosidases (levanase/invertase); Belongs to the glycosyl hydrolase 32 family.
 
     0.626
FP2_08780
ABC-type sugar transport system, periplasmic component.
 
  
 0.616
FP2_17220
Carbohydrate ABC transporter substrate-binding protein, CUT1 family (TC 3.A.1.1.-).
 
  
 0.611
FP2_24210
ABC-type sugar transport system, permease component.
 
  
 0.476
Your Current Organism:
Faecalibacterium prausnitzii L26
NCBI taxonomy Id: 718252
Other names: F. prausnitzii L2-6, Faecalibacterium prausnitzii L2-6, Faecalibacterium prausnitzii str. L2-6, Faecalibacterium prausnitzii strain L2-6, butyrate-producing bacterium L2-6
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