STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
FP2_09150Predicted transcriptional regulators. (101 aa)    
Predicted Functional Partners:
FP2_28540
Helix-turn-helix.
  
     0.699
FP2_09170
CobQ/CobB/MinD/ParA nucleotide binding domain.
  
     0.682
FP2_09290
Hypothetical protein.
  
     0.659
FP2_09230
Zn-dependent protease with chaperone function.
  
    0.616
FP2_09120
DNA binding domain, excisionase family.
  
    0.561
FP2_12980
Helix-turn-helix.
  
     0.520
FP2_09320
Hypothetical protein.
  
     0.501
FP2_09130
DNA binding domain, excisionase family.
  
    0.472
FP2_09260
Hypothetical protein.
  
    0.442
FP2_12930
3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase and related enzymes.
  
     0.405
Your Current Organism:
Faecalibacterium prausnitzii L26
NCBI taxonomy Id: 718252
Other names: F. prausnitzii L2-6, Faecalibacterium prausnitzii L2-6, Faecalibacterium prausnitzii str. L2-6, Faecalibacterium prausnitzii strain L2-6, butyrate-producing bacterium L2-6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.