STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FP2_09680Amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family. (257 aa)    
Predicted Functional Partners:
FP2_09660
ABC-type amino acid transport/signal transduction systems, periplasmic component/domain.
 
 0.997
FP2_09670
L-glutamate ABC transporter membrane protein/L-aspartate ABC transporter membrane protein.
 
 
 
0.992
FP2_26470
Amino acid ABC transporter substrate-binding protein, PAAT family (TC 3.A.1.3.-).
 
 0.984
FP2_29110
Amino acid ABC transporter ATP-binding protein, PAAT family (TC 3.A.1.3.-).
 
 
 0.934
FP2_05210
Amino acid ABC transporter ATP-binding protein, PAAT family (TC 3.A.1.3.-).
 
 
 0.932
FP2_05190
Amino acid ABC transporter substrate-binding protein, PAAT family (TC 3.A.1.3.-); Belongs to the bacterial solute-binding protein 3 family.
 
 
 0.850
FP2_29100
Amino acid ABC transporter substrate-binding protein, PAAT family (TC 3.A.1.3.-).
 
 
 0.825
FP2_15720
Amino acid ABC transporter substrate-binding protein, PAAT family (TC 3.A.1.3.-).
 
 
 0.814
FP2_29120
Amino acid ABC transporter membrane protein, PAAT family (TC 3.A.1.3.-).
 
  
 
0.555
FP2_24040
ABC-type Mn2+/Zn2+ transport systems, permease components.
   
 
 0.405
Your Current Organism:
Faecalibacterium prausnitzii L26
NCBI taxonomy Id: 718252
Other names: F. prausnitzii L2-6, Faecalibacterium prausnitzii L2-6, Faecalibacterium prausnitzii str. L2-6, Faecalibacterium prausnitzii strain L2-6, butyrate-producing bacterium L2-6
Server load: medium (44%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.