STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FP2_09880Nucleoside ABC transporter membrane protein; Belongs to the binding-protein-dependent transport system permease family. (305 aa)    
Predicted Functional Partners:
FP2_09870
Nucleoside ABC transporter membrane protein; Belongs to the binding-protein-dependent transport system permease family.
 
0.997
FP2_09850
Uncharacterized ABC-type transport system, periplasmic component/surface lipoprotein.
 
 
 0.973
FP2_29300
Uncharacterized ABC-type transport system, periplasmic component/surface lipoprotein.
 
 
 0.902
FP2_30690
Monosaccharide ABC transporter ATP-binding protein, CUT2 family (TC 3.A.1.2.-).
     0.685
FP2_09890
Thymidine phosphorylase.
 
   
 0.579
FP2_09840
Cytidine deaminase, homotetrameric.
 
  
 0.415
Your Current Organism:
Faecalibacterium prausnitzii L26
NCBI taxonomy Id: 718252
Other names: F. prausnitzii L2-6, Faecalibacterium prausnitzii L2-6, Faecalibacterium prausnitzii str. L2-6, Faecalibacterium prausnitzii strain L2-6, butyrate-producing bacterium L2-6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.