Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| FP2_10090 | FP2_14760 | FP2_10090 | FP2_14760 | Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog). | LSU ribosomal protein L22P; This protein binds specifically to 23S rRNA; its binding is stimulated by other ribosomal proteins, e.g., L4, L17, and L20. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome. | 0.921 |
| FP2_10090 | rplM | FP2_10090 | FP2_10290 | Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog). | LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 0.921 |
| FP2_10090 | rplN | FP2_10090 | FP2_14810 | Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog). | LSU ribosomal protein L14P; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family. | 0.922 |
| FP2_10090 | rplQ | FP2_10090 | FP2_15000 | Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog). | LSU ribosomal protein L17P. | 0.930 |
| FP2_10090 | rplS | FP2_10090 | FP2_07330 | Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog). | LSU ribosomal protein L19P; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site. | 0.950 |
| FP2_10090 | rplT | FP2_10090 | FP2_02160 | Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog). | LSU ribosomal protein L20P; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit. | 0.921 |
| FP2_10090 | rplW | FP2_10090 | FP2_14730 | Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog). | LSU ribosomal protein L23P; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome; Belongs to the universal ribosomal protein uL23 family. | 0.929 |
| FP2_10090 | rpmB | FP2_10090 | FP2_05910 | Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog). | LSU ribosomal protein L28P; Belongs to the bacterial ribosomal protein bL28 family. | 0.927 |
| FP2_10090 | rpmH | FP2_10090 | FP2_20110 | Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog). | LSU ribosomal protein L34P; Belongs to the bacterial ribosomal protein bL34 family. | 0.924 |
| FP2_10090 | rpmI | FP2_10090 | FP2_02150 | Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog). | LSU ribosomal protein L35P; Belongs to the bacterial ribosomal protein bL35 family. | 0.920 |
| FP2_14760 | FP2_10090 | FP2_14760 | FP2_10090 | LSU ribosomal protein L22P; This protein binds specifically to 23S rRNA; its binding is stimulated by other ribosomal proteins, e.g., L4, L17, and L20. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome. | Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog). | 0.921 |
| FP2_14760 | rplM | FP2_14760 | FP2_10290 | LSU ribosomal protein L22P; This protein binds specifically to 23S rRNA; its binding is stimulated by other ribosomal proteins, e.g., L4, L17, and L20. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome. | LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 0.998 |
| FP2_14760 | rplN | FP2_14760 | FP2_14810 | LSU ribosomal protein L22P; This protein binds specifically to 23S rRNA; its binding is stimulated by other ribosomal proteins, e.g., L4, L17, and L20. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome. | LSU ribosomal protein L14P; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family. | 0.999 |
| FP2_14760 | rplQ | FP2_14760 | FP2_15000 | LSU ribosomal protein L22P; This protein binds specifically to 23S rRNA; its binding is stimulated by other ribosomal proteins, e.g., L4, L17, and L20. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome. | LSU ribosomal protein L17P. | 0.995 |
| FP2_14760 | rplS | FP2_14760 | FP2_07330 | LSU ribosomal protein L22P; This protein binds specifically to 23S rRNA; its binding is stimulated by other ribosomal proteins, e.g., L4, L17, and L20. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome. | LSU ribosomal protein L19P; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site. | 0.993 |
| FP2_14760 | rplT | FP2_14760 | FP2_02160 | LSU ribosomal protein L22P; This protein binds specifically to 23S rRNA; its binding is stimulated by other ribosomal proteins, e.g., L4, L17, and L20. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome. | LSU ribosomal protein L20P; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit. | 0.993 |
| FP2_14760 | rplW | FP2_14760 | FP2_14730 | LSU ribosomal protein L22P; This protein binds specifically to 23S rRNA; its binding is stimulated by other ribosomal proteins, e.g., L4, L17, and L20. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome. | LSU ribosomal protein L23P; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome; Belongs to the universal ribosomal protein uL23 family. | 0.999 |
| FP2_14760 | rpmB | FP2_14760 | FP2_05910 | LSU ribosomal protein L22P; This protein binds specifically to 23S rRNA; its binding is stimulated by other ribosomal proteins, e.g., L4, L17, and L20. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome. | LSU ribosomal protein L28P; Belongs to the bacterial ribosomal protein bL28 family. | 0.991 |
| FP2_14760 | rpmH | FP2_14760 | FP2_20110 | LSU ribosomal protein L22P; This protein binds specifically to 23S rRNA; its binding is stimulated by other ribosomal proteins, e.g., L4, L17, and L20. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome. | LSU ribosomal protein L34P; Belongs to the bacterial ribosomal protein bL34 family. | 0.959 |
| FP2_14760 | rpmI | FP2_14760 | FP2_02150 | LSU ribosomal protein L22P; This protein binds specifically to 23S rRNA; its binding is stimulated by other ribosomal proteins, e.g., L4, L17, and L20. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome. | LSU ribosomal protein L35P; Belongs to the bacterial ribosomal protein bL35 family. | 0.991 |
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