Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
FP2_10200Multidrug resistance efflux pump. (370 aa)    
Predicted Functional Partners:
FP2_27540
Bacteriocin-processing peptidase. Cysteine peptidase. MEROPS family C39.
 
 
 0.955
FP2_10190
Bacterial surface proteins containing Ig-like domains.
 
   
 0.853
FP2_21460
ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain.
  
 
 0.848
FP2_10210
Hypothetical protein.
  
    0.814
FP2_24490
Fucose 4-O-acetylase and related acetyltransferases.
  
     0.679
FP2_28730
Hypothetical protein.
  
     0.673
FP2_10940
Hypothetical protein.
  
     0.654
FP2_28620
Hypothetical protein.
  
     0.652
FP2_10910
Uncharacterized protein conserved in bacteria C-term(DUF2220).
  
     0.641
FP2_13790
ABC-type antimicrobial peptide transport system, permease component.
  
  
 0.622
Your Current Organism:
Faecalibacterium prausnitzii L26
NCBI taxonomy Id: 718252
Other names: F. prausnitzii L2-6, Faecalibacterium prausnitzii L2-6, Faecalibacterium prausnitzii str. L2-6, Faecalibacterium prausnitzii strain L2-6, butyrate-producing bacterium L2-6
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