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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FP2_10430Hypothetical protein. (602 aa)    
Predicted Functional Partners:
FP2_05850
Sugar transferases involved in lipopolysaccharide synthesis.
  
  
 0.799
FP2_10420
FOG: GGDEF domain.
       0.724
FP2_10410
Predicted phosphohydrolases.
       0.690
FP2_10400
Hypothetical protein.
       0.620
FP2_10390
Glycosyltransferases involved in cell wall biogenesis.
  
  
 0.582
FP2_23140
Predicted glycosyltransferases.
  
  
 0.531
FP2_26530
Predicted glycosyltransferases.
  
  
 0.531
FP2_10380
Glycosyltransferase.
  
  
 0.530
FP2_10360
Glycosyltransferase.
  
  
 0.503
FP2_10370
Predicted Fe-S oxidoreductases.
       0.452
Your Current Organism:
Faecalibacterium prausnitzii L26
NCBI taxonomy Id: 718252
Other names: F. prausnitzii L2-6, Faecalibacterium prausnitzii L2-6, Faecalibacterium prausnitzii str. L2-6, Faecalibacterium prausnitzii strain L2-6, butyrate-producing bacterium L2-6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.