Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
FP2_10600Transcriptional regulators. (281 aa)    
Predicted Functional Partners:
FP2_17520
PTS system, glucose subfamily, IIA component.
 
  
 0.605
FP2_25460
PTS system IIA component, Glc family (TC 4.A.1).
  
  
 0.551
FP2_10580
Carbohydrate ABC transporter substrate-binding protein, CUT1 family (TC 3.A.1.1.-).
 
     0.516
FP2_26730
Uncharacterized protein; PTS system D-fructose-specific IIA component (F1P-forming), Frc family (TC 4.A.2.1.4)/PTS system D-fructose-specific IIB component (F1P-forming), Frc family (TC 4.A.2.1.4)/PTS system D-fructose-specific IIC component (F1P-forming), Frc family (TC 4.A.2.1.4).
     
 0.469
murQ
N-acetylmuramic acid 6-phosphate etherase; Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6-phosphate and D- lactate.
 
  
 0.469
FP2_10590
Hypothetical protein.
       0.460
FP2_10610
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase./Histidine kinase.
       0.458
FP2_10620
Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain.
       0.458
FP2_23290
Entner-Doudoroff aldolase.
 
   
 0.450
Your Current Organism:
Faecalibacterium prausnitzii L26
NCBI taxonomy Id: 718252
Other names: F. prausnitzii L2-6, Faecalibacterium prausnitzii L2-6, Faecalibacterium prausnitzii str. L2-6, Faecalibacterium prausnitzii strain L2-6, butyrate-producing bacterium L2-6
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