Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
FP2_10640ABC-type spermidine/putrescine transport systems, ATPase components; Belongs to the ABC transporter superfamily. (362 aa)    
Predicted Functional Partners:
FP2_10650
ABC-type Fe3+ transport system, permease component.
 
 0.997
FP2_10630
ABC-type Fe3+ transport system, periplasmic component.
 
 
 0.986
FP2_08080
ABC-type spermidine/putrescine transport system, permease component I.
 
 
 0.963
FP2_08070
ABC-type spermidine/putrescine transport system, permease component II.
 
 
 0.958
FP2_08060
Spermidine/putrescine-binding periplasmic protein.
 
 
 0.810
FP2_10620
Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain.
 
     0.654
FP2_24740
Carbohydrate ABC transporter ATP-binding protein, CUT1 family (TC 3.A.1.1.-); Belongs to the ABC transporter superfamily.
 
 
 
0.615
ecfA
ABC-type cobalt transport system, ATPase component; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates.
  
 
 
0.573
ecfA-2
ABC-type cobalt transport system, ATPase component; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates.
  
 
 
0.567
FP2_28940
ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component.
 
     
0.558
Your Current Organism:
Faecalibacterium prausnitzii L26
NCBI taxonomy Id: 718252
Other names: F. prausnitzii L2-6, Faecalibacterium prausnitzii L2-6, Faecalibacterium prausnitzii str. L2-6, Faecalibacterium prausnitzii strain L2-6, butyrate-producing bacterium L2-6
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