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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FP2_11540ABC-type multidrug transport system, ATPase and permease components. (573 aa)    
Predicted Functional Partners:
FP2_31100
ATPase components of various ABC-type transport systems, contain duplicated ATPase; Belongs to the ABC transporter superfamily.
 
     
0.682
FP2_04430
Conserved hypothetical integral membrane protein TIGR02185.
  
     0.564
FP2_11750
Conserved hypothetical integral membrane protein TIGR02185.
  
     0.564
FP2_23610
Conserved hypothetical integral membrane protein TIGR02185.
  
     0.549
FP2_14270
Conserved hypothetical integral membrane protein TIGR02185.
  
     0.526
FP2_23600
Transcriptional regulator, TetR family.
 
     0.521
FP2_23620
ABC-type cobalt transport system, permease component CbiQ and related transporters.
  
     0.512
FP2_27540
Bacteriocin-processing peptidase. Cysteine peptidase. MEROPS family C39.
 
 
  
0.466
FP2_11640
Transcriptional regulator.
 
     0.462
FP2_21460
ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain.
 
 
  
0.436
Your Current Organism:
Faecalibacterium prausnitzii L26
NCBI taxonomy Id: 718252
Other names: F. prausnitzii L2-6, Faecalibacterium prausnitzii L2-6, Faecalibacterium prausnitzii str. L2-6, Faecalibacterium prausnitzii strain L2-6, butyrate-producing bacterium L2-6
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