Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
FP2_11640Transcriptional regulator. (209 aa)    
Predicted Functional Partners:
FP2_19060
ABC-type multidrug transport system, ATPase and permease components.
 
     0.640
FP2_23640
ABC-type multidrug transport system, ATPase and permease components.
 
     0.637
FP2_14270
Conserved hypothetical integral membrane protein TIGR02185.
 
     0.619
FP2_23610
Conserved hypothetical integral membrane protein TIGR02185.
 
     0.606
FP2_23650
ABC-type multidrug transport system, ATPase and permease components.
 
     0.603
FP2_23630
ATPase components of various ABC-type transport systems, contain duplicated ATPase.
  
     0.596
FP2_27920
ABC-type multidrug transport system, ATPase and permease components.
 
     0.589
FP2_19090
ATPase components of various ABC-type transport systems, contain duplicated ATPase.
  
     0.582
FP2_14250
ABC-type multidrug transport system, ATPase and permease components.
 
     0.578
FP2_04400
ABC-type multidrug transport system, ATPase and permease components.
  
     0.570
Your Current Organism:
Faecalibacterium prausnitzii L26
NCBI taxonomy Id: 718252
Other names: F. prausnitzii L2-6, Faecalibacterium prausnitzii L2-6, Faecalibacterium prausnitzii str. L2-6, Faecalibacterium prausnitzii strain L2-6, butyrate-producing bacterium L2-6
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