STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FP2_12460Predicted 23S rRNA m(1)G methyltransferase. (279 aa)    
Predicted Functional Partners:
FP2_12480
Protein of unknown function (DUF1015).
 
     0.796
FP2_12470
Superfamily II DNA and RNA helicases; Belongs to the DEAD box helicase family.
       0.781
FP2_12490
Hypothetical protein.
       0.608
FP2_12530
Ribulose-5-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family.
  
    0.568
FP2_12510
Predicted NADH:ubiquinone oxidoreductase, subunit RnfE; Belongs to the NqrDE/RnfAE family.
       0.567
FP2_12500
Predicted NADH:ubiquinone oxidoreductase, subunit RnfA.
       0.554
FP2_12520
Predicted NADH:ubiquinone oxidoreductase, subunit RnfD; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the NqrB/RnfD family.
       0.554
FP2_23140
Predicted glycosyltransferases.
  
 
 0.439
FP2_26530
Predicted glycosyltransferases.
  
 
 0.439
Your Current Organism:
Faecalibacterium prausnitzii L26
NCBI taxonomy Id: 718252
Other names: F. prausnitzii L2-6, Faecalibacterium prausnitzii L2-6, Faecalibacterium prausnitzii str. L2-6, Faecalibacterium prausnitzii strain L2-6, butyrate-producing bacterium L2-6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.