Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
FP2_12530Ribulose-5-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family. (216 aa)    
Predicted Functional Partners:
FP2_32130
Transketolase, N-terminal subunit.
  
 0.996
FP2_32120
Transketolase, C-terminal subunit.
 
 
 0.962
FP2_25820
Ribose-5-phosphate isomerase.
 
 
 0.949
FP2_18120
Sugar kinases, ribokinase family.
  
 0.850
FP2_23280
Sugar kinases, ribokinase family.
  
 0.850
FP2_23350
D-altronate dehydratase.
     
 0.806
uxuA
D-mannonate dehydratase; Catalyzes the dehydration of D-mannonate.
     
 0.802
FP2_12510
Predicted NADH:ubiquinone oxidoreductase, subunit RnfE; Belongs to the NqrDE/RnfAE family.
       0.773
FP2_12500
Predicted NADH:ubiquinone oxidoreductase, subunit RnfA.
       0.761
FP2_12520
Predicted NADH:ubiquinone oxidoreductase, subunit RnfD; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the NqrB/RnfD family.
       0.761
Your Current Organism:
Faecalibacterium prausnitzii L26
NCBI taxonomy Id: 718252
Other names: F. prausnitzii L2-6, Faecalibacterium prausnitzii L2-6, Faecalibacterium prausnitzii str. L2-6, Faecalibacterium prausnitzii strain L2-6, butyrate-producing bacterium L2-6
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