Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
FP2_13580Ribose 5-phosphate isomerase RpiB. (212 aa)    
Predicted Functional Partners:
FP2_13570
Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases).
 
   
 0.763
FP2_31370
Conserved hypothetical protein TIGR01440; Belongs to the UPF0340 family.
  
    0.561
mnmA
tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase; Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34.
  
    0.558
FP2_32120
Transketolase, C-terminal subunit.
    
 0.557
FP2_19990
Pyruvate:ferredoxin (flavodoxin) oxidoreductase, homodimeric.
     
 0.551
FP2_32130
Transketolase, N-terminal subunit.
    
 0.545
FP2_23260
Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases).
 
   
 0.520
FP2_23290
Entner-Doudoroff aldolase.
 
   
 0.517
FP2_26730
Uncharacterized protein; PTS system D-fructose-specific IIA component (F1P-forming), Frc family (TC 4.A.2.1.4)/PTS system D-fructose-specific IIB component (F1P-forming), Frc family (TC 4.A.2.1.4)/PTS system D-fructose-specific IIC component (F1P-forming), Frc family (TC 4.A.2.1.4).
     
 0.496
FP2_09760
Pyruvate kinase; Belongs to the pyruvate kinase family.
     
 0.472
Your Current Organism:
Faecalibacterium prausnitzii L26
NCBI taxonomy Id: 718252
Other names: F. prausnitzii L2-6, Faecalibacterium prausnitzii L2-6, Faecalibacterium prausnitzii str. L2-6, Faecalibacterium prausnitzii strain L2-6, butyrate-producing bacterium L2-6
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