Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
FP2_13760Hypothetical protein. (426 aa)    
Predicted Functional Partners:
FP2_13770
Response regulator of the LytR/AlgR family.
 
  
 0.955
FP2_13750
Beta-glucosidase-related glycosidases.
 
     0.860
FP2_13730
GtrA-like protein.
 
     0.847
FP2_10500
Response regulator of the LytR/AlgR family.
 
  
 0.802
FP2_13740
Beta-glucosidase-related glycosidases.
 
     0.741
FP2_10460
Na+/melibiose symporter and related transporters.
  
     0.615
FP2_08170
Response regulator of the LytR/AlgR family.
 
  
 0.592
FP2_01270
Response regulator of the LytR/AlgR family.
 
  
 0.496
FP2_13800
ABC-type antimicrobial peptide transport system, ATPase component.
       0.492
FP2_13780
S-layer homology domain.
       0.486
Your Current Organism:
Faecalibacterium prausnitzii L26
NCBI taxonomy Id: 718252
Other names: F. prausnitzii L2-6, Faecalibacterium prausnitzii L2-6, Faecalibacterium prausnitzii str. L2-6, Faecalibacterium prausnitzii strain L2-6, butyrate-producing bacterium L2-6
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