STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FP2_13770Response regulator of the LytR/AlgR family. (236 aa)    
Predicted Functional Partners:
FP2_13760
Hypothetical protein.
 
  
 0.955
FP2_13750
Beta-glucosidase-related glycosidases.
 
     0.804
FP2_24650
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase./Histidine kinase./HAMP domain.
 
 
 0.730
FP2_13730
GtrA-like protein.
 
     0.678
FP2_10610
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase./Histidine kinase.
 
  
 0.671
FP2_29900
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase./Histidine kinase./HAMP domain.
 
  
 0.655
FP2_13740
Beta-glucosidase-related glycosidases.
 
     0.582
FP2_13790
ABC-type antimicrobial peptide transport system, permease component.
 
     0.570
FP2_13800
ABC-type antimicrobial peptide transport system, ATPase component.
 
     0.548
FP2_13780
S-layer homology domain.
  
    0.497
Your Current Organism:
Faecalibacterium prausnitzii L26
NCBI taxonomy Id: 718252
Other names: F. prausnitzii L2-6, Faecalibacterium prausnitzii L2-6, Faecalibacterium prausnitzii str. L2-6, Faecalibacterium prausnitzii strain L2-6, butyrate-producing bacterium L2-6
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