STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FP2_13780S-layer homology domain. (713 aa)    
Predicted Functional Partners:
FP2_13810
RND family efflux transporter, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
     0.944
FP2_13790
ABC-type antimicrobial peptide transport system, permease component.
 
     0.804
FP2_13800
ABC-type antimicrobial peptide transport system, ATPase component.
       0.777
FP2_16200
RND family efflux transporter, MFP subunit.
 
     0.776
FP2_27890
Hypothetical protein.
  
     0.713
FP2_32250
Hypothetical protein.
  
     0.672
FP2_26970
Mn-dependent transcriptional regulator.
  
     0.651
FP2_23660
Hypothetical protein.
  
     0.626
FP2_31950
Protein of unknown function (DUF3048).
 
   
 0.614
FP2_18630
Transglutaminase-like enzymes, putative cysteine proteases.
  
     0.600
Your Current Organism:
Faecalibacterium prausnitzii L26
NCBI taxonomy Id: 718252
Other names: F. prausnitzii L2-6, Faecalibacterium prausnitzii L2-6, Faecalibacterium prausnitzii str. L2-6, Faecalibacterium prausnitzii strain L2-6, butyrate-producing bacterium L2-6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.