Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
FP2_15610ABC-type oligopeptide transport system, periplasmic component. (674 aa)    
Predicted Functional Partners:
FP2_15590
ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
 
 
 0.803
FP2_26810
ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
 
 
 0.772
FP2_15580
ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
 
  
 0.771
FP2_26800
ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
 
  
 0.758
FP2_15560
ATPase components of various ABC-type transport systems, contain duplicated ATPase; Belongs to the ABC transporter superfamily.
 
 
 0.748
FP2_15570
ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component; Belongs to the ABC transporter superfamily.
 
  
 0.716
FP2_26790
ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component; Belongs to the ABC transporter superfamily.
 
  
 0.689
FP2_26780
ATPase components of various ABC-type transport systems, contain duplicated ATPase; Belongs to the ABC transporter superfamily.
 
  
 0.669
FP2_31110
Oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain; Belongs to the ABC transporter superfamily.
 
  
 0.551
FP2_31120
ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
 
  
 0.535
Your Current Organism:
Faecalibacterium prausnitzii L26
NCBI taxonomy Id: 718252
Other names: F. prausnitzii L2-6, Faecalibacterium prausnitzii L2-6, Faecalibacterium prausnitzii str. L2-6, Faecalibacterium prausnitzii strain L2-6, butyrate-producing bacterium L2-6
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